Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_34585263_34585622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34585263 - 34585622

Intron Length:

360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTTG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

TTCCCAGCAACA

Flanking Amino Acid:

VDLERQGQGQLVTCSGAFKE

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

72.3

39.7

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

87.9

0.85

0.8

80.2

37.3

Minor 5ss

40.4

-1.1

3.3

55.5

48.6

Minor BPS

44.3

-0.4

2.3

62.43

43.4

Associated Gene:

Gene:

DDB1

Ensembl Gene ID:

ENSAPLG00000007174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007508

34574748 - 34592616

17869