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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34585726_34585884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34585726 - 34585884

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGCTGTGAACA

Flanking Amino Acid:

HASIDLPGIKGLWPLRSDCH

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

70.1

35.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.2

0.7

0.8

75.8

32.7

Minor 5ss

32.7

-2

3.1

39.1

46.7

Minor BPS

48.4

-0.1

2.1

65.21

41.1

Associated Gene:

Gene:

DDB1

Ensembl Gene ID:

ENSAPLG00000007174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007508

34574748 - 34592616

17869