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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34604814_34604949_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34604814 - 34604949

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCGGGCAGG

5'SS Class:

major

3'SS Sequence:

CACTGCAGATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGCTGCTGACCC

Flanking Amino Acid:

ALGANSEGEVSCSAVSSLPD

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

61.3

43.4

Major BPS

66.3

0.4

1.1

41.8

Major PPT

54.7

0.11

1.1

51.9

41.2

Minor 5ss

21.6

-3.3

3.8

30.1

43.2

Minor BPS

44.1

-0.4

2.1

52.58

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048518

34604461 - 34606409

1949