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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34605283_34605386_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34605283 - 34605386

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCCCC

5'SS Class:

major

3'SS Sequence:

TTCCCCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TGTGTCTGATGG

Flanking Amino Acid:

AQDLFSVYLSKDDKSGSFVL

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

63.5

41.4

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

80.7

0.69

0.7

77.5

24.4

Minor 5ss

40.8

-1

52.8

Minor BPS

42.3

-0.7

48.13

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046301

34604461 - 34607940

3480

ENSAPLT00000048518

34604461 - 34606409

1949