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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34609544_34609810_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34609544 - 34609810

Intron Length:

267

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCCAGGTGA

5'SS Class:

major

3'SS Sequence:

ATCAGCTGCAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTACAA

U12 Branch Point Sequence:

AGTACAAGATCA

Flanking Amino Acid:

RHIGASEYPSAKKSLPDIVF

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.3

54.3

42.8

Major BPS

49.8

-0

1.1

58.8

38.1

Major PPT

45.5

-0.2

1.7

45.4

40.8

Minor 5ss

21.7

-3.3

3.8

Minor BPS

39.3

-0.8

51.33

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008083

34608911 - 34613134

4224