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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34623922_34624186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34623922 - 34624186

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

AAGTGCTGAGGG

Flanking Amino Acid:

ESQKIEEESEKMAEKFLEGE

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

80.2

30.7

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

89.3

0.88

0.6

84.5

23.3

Minor 5ss

-0.9

55.3

48.9

Minor BPS

38.4

-1

2.2

39.73

43.7

Associated Gene:

Gene:

VPS37C

Ensembl Gene ID:

ENSAPLG00000029540

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026342

34622437 - 34625836

3400

ENSAPLT00000043733

34622437 - 34625836

3400