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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34628151_34628232_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34628151 - 34628232

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

CGTCCTCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGACAT

U12 Branch Point Sequence:

CGTCCTCTCACA

Flanking Amino Acid:

LRSCSRTRVVCQDSKPHPAG

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.1

64.4

41.2

Major BPS

49.9

-0

1.4

60.7

45.9

Major PPT

74.7

0.56

0.8

67.9

32.2

Minor 5ss

-1.7

3.3

44.4

43.5

Minor BPS

45.9

-0.3

58.02

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046732

34626156 - 34635216

9061

ENSAPLT00000045708

34626156 - 34631765

5610