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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34628518_34629211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34628518 - 34629211

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGGGCAT

U12 Branch Point Sequence:

TCTTCTCCCACA

Flanking Amino Acid:

GRAPAFLTCSGSQPQAVRRL

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

-0.4

1.5

46.5

Major PPT

81.7

0.71

0.7

76.4

25.8

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

45.9

-0.3

2.2

63.87

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046732

34626156 - 34635216

9061

ENSAPLT00000045708

34626156 - 34631765

5610