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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34630046_34630438_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34630046 - 34630438

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

AGCCCCTTATGG

Flanking Amino Acid:

SHRGAALDNKAPLLRLTGGS

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.5

33.9

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

72.1

0.5

0.8

64.9

30.8

Minor 5ss

36.6

-1.5

2.9

49.5

46.5

Minor BPS

46.1

-0.4

47.9

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046732

34626156 - 34635216

9061

ENSAPLT00000045708

34626156 - 34631765

5610