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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34630478_34631383_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34630478 - 34631383

Intron Length:

906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TACAGCTGATCC

Flanking Amino Acid:

LRLLLALGAWAICSHRGAAL

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.4

40.3

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

30.2

-2.3

2.5

26.6

35.9

Minor BPS

43.4

-0.5

2.1

53.19

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046732

34626156 - 34635216

9061

ENSAPLT00000045708

34626156 - 34631765

5610