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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34634889_34635378_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34634889 - 34635378

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCAGGGCGA

5'SS Class:

weak_major

3'SS Sequence:

GCAGGGCTGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCACAT

U12 Branch Point Sequence:

GGGGTGGCAGCA

Flanking Amino Acid:

DSLRRQPGEQQCQCVPLPPP

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.3

0.17

1.4

49.7

39.3

Major BPS

48.9

-0

1.2

56.9

40.5

Major PPT

41.4

-0.4

1.7

34.6

40.9

Minor 5ss

20.6

-3.4

4.1

33.9

42.9

Minor BPS

27.7

-1.7

2.3

32.02

Associated Gene:

Gene:

CD6

Ensembl Gene ID:

ENSAPLG00000018616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035189

34634531 - 34639506

4976