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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34637021_34637164_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34637021 - 34637164

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCACCGAG

5'SS Class:

weak_major

3'SS Sequence:

GCGGTGCCAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCACAG

U12 Branch Point Sequence:

CCTCCCGGCACG

Flanking Amino Acid:

WALEPCWLRLRSPIPTAAPA

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.9

0.14

1.3

47.4

45.6

Major BPS

-0.4

1.4

48.6

36.6

Major PPT

0.11

1.1

47.7

40.4

Minor 5ss

26.5

-2.7

4.1

34.5

43.8

Minor BPS

39.4

-0.9

2.4

45.08

46.9

Associated Gene:

Gene:

CD6

Ensembl Gene ID:

ENSAPLG00000018616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035189

34634531 - 34639506

4976