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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34651386_34651595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34651386 - 34651595

Intron Length:

210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATCAC

U12 Branch Point Sequence:

CTGGTATCACCC

Flanking Amino Acid:

QSCVLRQCLAPRLPHSVTCA

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.1

43.2

Major BPS

60.6

0.26

1.3

65.7

Major PPT

85.2

0.79

0.6

80.9

24.2

Minor 5ss

32.9

-2

42.1

44.4

Minor BPS

39.8

-0.8

46.54

42.9

Associated Gene:

Gene:

KDM2A

Ensembl Gene ID:

ENSAPLG00000003636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003742

34647132 - 34682054

34923