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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34661402_34662513_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34661402 - 34662513

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

CCGGTCTGAACT

Flanking Amino Acid:

RIYSIEDRTRVPNKFRYPFY

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

84.2

0.77

0.7

79.1

26.3

Minor 5ss

31.2

-2.2

3.1

31.3

42.6

Minor BPS

51.8

0.14

1.6

63.52

46.9

Associated Gene:

Gene:

KDM2A

Ensembl Gene ID:

ENSAPLG00000003636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003742

34647132 - 34682054

34923