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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34689189_34689271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34689189 - 34689271

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

GCTGCTGTCACT

Flanking Amino Acid:

GRQEPITSQQGEAMARQVHA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

75.7

34.4

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

67.4

0.39

67.7

32.6

Minor 5ss

30.4

-2.2

3.5

42.4

45.1

Minor BPS

44.2

-0.3

2.4

63.47

47.2

Associated Gene:

Gene:

RHOD

Ensembl Gene ID:

ENSAPLG00000018804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033931

34689021 - 34692356

3336