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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34689407_34690168_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34689407 - 34690168

Intron Length:

762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

CCGTTCCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCTAT

U12 Branch Point Sequence:

TCTGTCCCACCC

Flanking Amino Acid:

MVFARGDFPKWYPEVNHFCK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

49.4

-0

1.2

48.1

37.3

Major PPT

71.4

0.48

0.8

64.7

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

41.9

-0.6

2.1

54.29

43.9

Associated Gene:

Gene:

RHOD

Ensembl Gene ID:

ENSAPLG00000018804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033931

34689021 - 34692356

3336