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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34770571_34770850_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34770571 - 34770850

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTACTTGCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACTT

Flanking Amino Acid:

ESFEEAKEKMREFAKTIKRP

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

79.7

36.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

72.4

0.51

0.9

68.7

37.1

Minor 5ss

41.6

-0.9

3.6

64.2

47.3

Minor BPS

70.1

0.71

1.5

86.64

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004421

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004571

34770396 - 34782699

12304