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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34827983_34828291_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34827983 - 34828291

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCAT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

SSPPLPVVTLRMDPHCTTSS

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

71.5

39.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

32.5

-2

3.4

47.3

48.1

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005518

34814087 - 34828945

14859