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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34843252_34844850_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34843252 - 34844850

Intron Length:

1599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

CTCTCTGTATGC

Flanking Amino Acid:

QDVGISAAFLADVRPQTDGC

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.4

37.6

Major BPS

0.47

69.9

32.6

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

45.8

-0.4

2.5

55.3

44.2

Minor BPS

41.8

-0.6

2.4

52.75

45.6

Associated Gene:

Gene:

GTF2H1

Ensembl Gene ID:

ENSAPLG00000005620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005841

34837833 - 34855231

17399