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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34845821_34846844_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34845821 - 34846844

Intron Length:

1024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTTTCATA

Flanking Amino Acid:

FAECAKLDEKGLKTMVSQGV

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.9

0.79

0.8

80.6

30.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

71.1

0.66

1.7

82.68

32.7

Associated Gene:

Gene:

GTF2H1

Ensembl Gene ID:

ENSAPLG00000005620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005841

34837833 - 34855231

17399