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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34897456_34899321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34897456 - 34899321

Intron Length:

1866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCAAAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TCTTTGTCAAAG

Flanking Amino Acid:

PYPPGSTANPSYPNYPYPGG

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

87.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

68.7

0.42

64.8

40.3

Minor 5ss

36.1

-1.6

50.2

45.8

Minor BPS

45.4

-0.4

2.3

56.14

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006585

34889394 - 34909913

20520