Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_34919349_34920453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34919349 - 34920453

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCAGGGGGC

5'SS Class:

major

3'SS Sequence:

TTTTTAATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGATTTTTAATT

Flanking Amino Acid:

GRVRGAAGKRAFKDGSQKDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

68.9

35.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.6

0.87

0.8

86.6

31.3

Minor 5ss

-3.7

4.2

28.3

Minor BPS

73.2

0.81

1.1

80.88

34.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027958

34919272 - 34920520

1249