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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34929728_34931807_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34929728 - 34931807

Intron Length:

2080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCTTG

5'SS Class:

weak_major

3'SS Sequence:

ACTTATTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTCAACTTATTT

Flanking Amino Acid:

WREQQKEEARSLRLGVQEDL

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

41.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

73.2

0.52

69.3

40.8

Minor 5ss

62.5

0.42

2.3

72.7

44.5

Minor BPS

54.1

0.21

1.8

73.56

43.4

Associated Gene:

Gene:

SPTY2D1

Ensembl Gene ID:

ENSAPLG00000006866

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042226

34929466 - 34940350

10885

ENSAPLT00000007125

34929466 - 34942709

13244