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Intron Name: Anas_platyrhynchos_platyrhynchos_5_34935121_34936496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34935121 - 34936496

Intron Length:

1376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTTTGCTTAACT

Flanking Amino Acid:

RRKEEEKRKKALEEKRKKEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.1

78.8

35.5

Major BPS

78.8

0.71

67.6

40.6

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

40.9

-1

3.2

59.5

Minor BPS

84.1

1.15

1.6

100

28.8

Associated Gene:

Gene:

SPTY2D1

Ensembl Gene ID:

ENSAPLG00000006866

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042226

34929466 - 34940350

10885

ENSAPLT00000007125

34929466 - 34942709

13244