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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35046994_35047468_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35046994 - 35047468

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TCCCTGTTAAAA

Flanking Amino Acid:

SSYINANYIRGYGGVEKVYI

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

37.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

76.4

0.59

1.1

72.9

42.2

Minor 5ss

32.6

-2

3.4

40.6

45.1

Minor BPS

46.8

-0.2

2.1

57.08

42.4

Associated Gene:

Gene:

PTPN5

Ensembl Gene ID:

ENSAPLG00000007215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007505

35032929 - 35089118

56190