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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35054013_35057328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35054013 - 35057328

Intron Length:

3316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTAG

5'SS Class:

major

3'SS Sequence:

CTCTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TGTAAGCTAACT

Flanking Amino Acid:

LTVKSVGLQERRGSNVSLTL

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

66.6

41.6

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

84.9

0.78

0.8

79.6

32.4

Minor 5ss

34.7

-1.7

3.5

45.4

49.7

Minor BPS

45.3

-0.2

2.4

71.75

44.2

Associated Gene:

Gene:

PTPN5

Ensembl Gene ID:

ENSAPLG00000007215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007505

35032929 - 35089118

56190