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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35062791_35064588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35062791 - 35064588

Intron Length:

1798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TACTTCATAATT

Flanking Amino Acid:

FERFLSDQGEDLTRIGSVVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.8

78.8

35.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

80.4

0.68

0.9

74.1

40.3

Minor 5ss

35.5

-1.6

2.8

45.4

42.6

Minor BPS

63.5

0.5

1.6

77.53

39.1

Associated Gene:

Gene:

PTPN5

Ensembl Gene ID:

ENSAPLG00000007215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007505

35032929 - 35089118

56190