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Intron Name: Anas_platyrhynchos_platyrhynchos_5_3530887_3582030_F

Intron Information:

Intron Rank:

146181

Intron Class:

major

Intron Phase:

Intron Coordinates:

3530887 - 3582030

Intron Length:

51144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTGTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TATTGCTAACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

77.1

0.61

0.9

71.7

38.2

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

48.3

-0.1

2.3

67.06

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041821

3530550 - 3623673

93124