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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35447771_35448846_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35447771 - 35448846

Intron Length:

1076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

AATCACTTAAAC

Flanking Amino Acid:

MGRRAVGLLLVTLLIMSGNR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.6

37.6

Major BPS

0.47

69.9

32.6

Major PPT

74.5

0.55

0.9

69.5

36.8

Minor 5ss

27.7

-2.6

29.4

36.9

Minor BPS

58.4

0.24

1.6

66.72

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002395

35447741 - 35453951

6211