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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35450908_35453808_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

35450908 - 35453808

Intron Length:

2901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTGTGAATT

5'SS Class:

weak_major

3'SS Sequence:

GCTGAAAAATCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TATTTGACAACT

Flanking Amino Acid:

HKYHMAWSVGFKLYLKLFSL

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.26

1.1

66.2

38.9

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

50.4

0.01

1.1

43.8

Minor 5ss

-0.9

3.1

58.4

45.9

Minor BPS

46.6

-0.1

2.4

74.2

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002395

35447741 - 35453951

6211