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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35458097_35463175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35458097 - 35463175

Intron Length:

5079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCGC

5'SS Class:

major

3'SS Sequence:

TCTGTCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTGTCTTTACA

Flanking Amino Acid:

MAAAAAEPASSYSFILSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

58.8

42.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.7

0.8

79.7

32.4

Minor 5ss

30.7

-2.2

3.2

33.6

41.9

Minor BPS

60.1

0.31

1.8

70.34

42.1

Associated Gene:

Gene:

CARS1

Ensembl Gene ID:

ENSAPLG00000015062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020137

35457080 - 35488245

31166