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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35475203_35475608_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35475203 - 35475608

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTATTTTAACA

Flanking Amino Acid:

EPSWDSPWGKGRPGWHIECS

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

84.3

0.77

0.9

81.1

35.2

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

77.6

0.86

1.1

83.48

30.3

Associated Gene:

Gene:

CARS1

Ensembl Gene ID:

ENSAPLG00000015062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030598

35457080 - 35488245

31166

ENSAPLT00000020137

35457080 - 35488245

31166

ENSAPLT00000015778

35466911 - 35491015

24105