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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35475738_35475963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35475738 - 35475963

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTGAG

U12 Branch Point Sequence:

ACAGCATTGAGT

Flanking Amino Acid:

HHDNELAQSEAYFENDHWVR

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.6

32.8

Major BPS

52.3

0.06

1.5

52.7

43.2

Major PPT

82.7

0.74

0.9

77.3

Minor 5ss

27.4

-2.6

2.9

31.8

42.6

Minor BPS

45.4

-0.2

58.93

44.3

Associated Gene:

Gene:

CARS1

Ensembl Gene ID:

ENSAPLG00000015062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030598

35457080 - 35488245

31166

ENSAPLT00000020137

35457080 - 35488245

31166

ENSAPLT00000015778

35466911 - 35491015

24105