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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35498870_35500544_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

35498870 - 35500544

Intron Length:

1675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCAACTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TGTATTTCAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

86.3

Major BPS

0.79

0.8

83.7

25.7

Major PPT

0.7

0.9

74.3

35.1

Minor 5ss

49.5

-0

2.5

68.8

35.6

Minor BPS

60.9

0.42

1.6

77.43

38.9

Associated Gene:

Gene:

NAP1L4

Ensembl Gene ID:

ENSAPLG00000014701

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032862

35498829 - 35514589

15761

ENSAPLT00000015349

35498829 - 35520539

21711