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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35505474_35506774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35505474 - 35506774

Intron Length:

1301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

ATTGCCTGCACC

Flanking Amino Acid:

NVDMLSELVQEYDEPILKHL

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

89.8

0.9

0.6

89.2

19.6

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

52.9

0.07

69.62

41.7

Associated Gene:

Gene:

NAP1L4

Ensembl Gene ID:

ENSAPLG00000014701

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015349

35498829 - 35520539

21711

ENSAPLT00000032862

35498829 - 35514589

15761