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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35542935_35543020_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

35542935 - 35543020

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCGGGCACC

5'SS Class:

major

3'SS Sequence:

GGCCCCAGGTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGCCAC

U12 Branch Point Sequence:

CCACCCGGCACG

Flanking Amino Acid:

FKSRQEMEQAPEPPALCLAA

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.3

63.6

39.5

Major BPS

41.1

-0.5

1.2

41.4

Major PPT

41.3

-0.5

1.7

39.2

Minor 5ss

-3

3.9

35.2

41.3

Minor BPS

36.9

-1.1

2.3

38.09

44.4

Associated Gene:

Gene:

PHLDA2

Ensembl Gene ID:

ENSAPLG00000014648

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015261

35542575 - 35543113

539