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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35550244_35553484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35550244 - 35553484

Intron Length:

3241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TCTCTAATGATC

Flanking Amino Acid:

LVFAGVGLGMALMRTVWHYC

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

76.8

0.67

40.9

Major PPT

70.4

0.46

0.9

69.5

36.8

Minor 5ss

36.8

-1.5

3.5

53.4

44.8

Minor BPS

44.8

-0.4

1.8

56.65

35.8

Associated Gene:

Gene:

SLC22A18

Ensembl Gene ID:

ENSAPLG00000014592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026159

35545052 - 35606265

61214

ENSAPLT00000015226

35545128 - 35607054

61927