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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35553587_35562621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35553587 - 35562621

Intron Length:

9035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

AGTGGATTAACA

Flanking Amino Acid:

LMSYFGVLQMVVQGLVVGKL

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

69.8

0.49

70.3

31.8

Major PPT

74.6

0.55

0.8

65.7

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

48.9

-0

2.1

63.76

42.2

Associated Gene:

Gene:

SLC22A18

Ensembl Gene ID:

ENSAPLG00000014592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026159

35545052 - 35606265

61214

ENSAPLT00000015226

35545128 - 35607054

61927