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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35897665_35907813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35897665 - 35907813

Intron Length:

10149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

SYADALWWGVVTVTTIGYGD

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.93

0.8

83.5

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

39.5

-1.2

2.8

48.4

41.7

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

KCNQ1

Ensembl Gene ID:

ENSAPLG00000014530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015138

35652060 - 35991226

339167