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Intron Name: Anas_platyrhynchos_platyrhynchos_5_35994_39110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35994 - 39110

Intron Length:

3117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GAATTCTTAATC

Flanking Amino Acid:

ARIQEITSCKLFDRLREEQP

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

27.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

0.56

71.2

38.5

Minor 5ss

46.4

-0.4

2.5

62.6

42.2

Minor BPS

70.2

0.61

1.2

69.04

Associated Gene:

Gene:

FAR1

Ensembl Gene ID:

ENSAPLG00000005107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037805

6668 - 51974

45307

ENSAPLT00000005315

16966 - 51974

35009