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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36025243_36026558_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

36025243 - 36026558

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGCTCA

5'SS Class:

major

3'SS Sequence:

CAACTCCCAATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TCTGTTTCAACT

Flanking Amino Acid:

WKDILQWTATIQNIISHQHL

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.1

58.7

36.8

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

57.7

0.17

0.9

51.9

32.1

Minor 5ss

40.9

-1

2.9

53.5

44.4

Minor BPS

58.6

0.35

1.6

74.97

42.5

Associated Gene:

Gene:

TRPM5

Ensembl Gene ID:

ENSAPLG00000014148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014798

36016590 - 36050096

33507

ENSAPLT00000030166

36016590 - 36056037

39448