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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36031926_36033898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36031926 - 36033898

Intron Length:

1973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCATCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

ATTTCCTTCATC

Flanking Amino Acid:

KEAKYEQLAVELFSECYRNS

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

70.2

0.5

1.1

77.2

Major PPT

73.1

0.52

69.1

36.6

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

0.68

1.7

80.61

34.3

Associated Gene:

Gene:

TRPM5

Ensembl Gene ID:

ENSAPLG00000014148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030166

36016590 - 36056037

39448

ENSAPLT00000014798

36016590 - 36050096

33507