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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36039179_36040446_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36039179 - 36040446

Intron Length:

1268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

TTAAACAGATCA

Flanking Amino Acid:

FTLVLEEIRQSFFTDEDTNL

Intron Amino Acid Position:

779

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.2

81.4

32.7

Major BPS

0.7

0.9

79.6

29.1

Major PPT

92.7

0.96

0.6

91.8

19.2

Minor 5ss

31.4

-2.1

2.5

36.7

40.4

Minor BPS

41.7

-0.6

56.7

41.3

Associated Gene:

Gene:

TRPM5

Ensembl Gene ID:

ENSAPLG00000014148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014798

36016590 - 36050096

33507

ENSAPLT00000030166

36016590 - 36056037

39448