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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36041232_36043617_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36041232 - 36043617

Intron Length:

2386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTCAT

U12 Branch Point Sequence:

TCCTCCTTTTCT

Flanking Amino Acid:

GPKIIIVERMMKDVFFFLFF

Intron Amino Acid Position:

863

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

64.7

0.37

1.2

39.8

Major PPT

0.9

0.6

89.4

19.2

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

45.2

-0.2

3.6

75.7

46.9

Associated Gene:

Gene:

TRPM5

Ensembl Gene ID:

ENSAPLG00000014148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030166

36016590 - 36056037

39448

ENSAPLT00000014798

36016590 - 36050096

33507