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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36050169_36054377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36050169 - 36054377

Intron Length:

4209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

ACCTATTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TGAAAATTAACT

Flanking Amino Acid:

ERRLKVIESQICYCTAVISS

Intron Amino Acid Position:

1106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

74.8

0.56

0.9

69.3

35.9

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

54.4

0.22

1.8

73.56

Associated Gene:

Gene:

TRPM5

Ensembl Gene ID:

ENSAPLG00000014148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030166

36016590 - 36056037

39448