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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36110016_36110531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36110016 - 36110531

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAGAC

U12 Branch Point Sequence:

GTAGACTGGATT

Flanking Amino Acid:

PPSQAQAAGQHSSEVMEKPP

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.7

33.8

Major BPS

54.1

0.1

1.2

52.4

43.3

Major PPT

76.3

0.59

0.9

68.5

37.3

Minor 5ss

39.7

-1.2

2.8

49.8

46.2

Minor BPS

46.5

-0.2

1.8

62.3

41.6

Associated Gene:

Gene:

CD81

Ensembl Gene ID:

ENSAPLG00000023901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025682

36072062 - 36132217

60156

ENSAPLT00000020965

36072062 - 36131204

59143

ENSAPLT00000019393

36072062 - 36131204

59143