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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36192697_36193098_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36192697 - 36193098

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGCACTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCACAA

U12 Branch Point Sequence:

TGTACCCCCACC

Flanking Amino Acid:

QLEDVSRFLKERTGFQLRPV

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.8

38.7

Major BPS

48.8

-0

54.9

31.1

Major PPT

72.8

0.51

68.8

41.8

Minor 5ss

32.5

-2

3.1

41.1

45.5

Minor BPS

44.6

-0.4

2.2

61.43

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047165

36182201 - 36198065

15865

ENSAPLT00000013660

36182201 - 36198065

15865