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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36193403_36194019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36193403 - 36194019

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

CTATCCTGAGGT

Flanking Amino Acid:

ADKTFAQFSQDIGLASLGAT

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

70.4

42.5

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

85.1

0.79

0.8

76.7

37.4

Minor 5ss

36.1

-1.6

3.3

46.8

48.5

Minor BPS

49.2

0.02

69.76

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047165

36182201 - 36198065

15865

ENSAPLT00000013660

36182201 - 36198065

15865