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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36213825_36216877_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36213825 - 36216877

Intron Length:

3053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TATGGCTTATAT

Flanking Amino Acid:

KTRRDVEQPLVNGPLHGEVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

75.8

0.64

65.8

Major PPT

73.2

0.52

0.9

69.2

31.3

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

47.8

-0

2.2

70.25

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013068

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013599

36212463 - 36217094

4632