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Intron Name: Anas_platyrhynchos_platyrhynchos_5_36478879_36480695_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

36478879 - 36480695

Intron Length:

1817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

ATTCCTGTAAAG

Flanking Amino Acid:

VAAVRTRIQYGANNKRNHKN

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

84.8

0.86

85.7

34.9

Major PPT

85.5

0.8

80.7

31.2

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

48.5

-0.2

2.1

60.47

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042751

36470745 - 36482051

11307

ENSAPLT00000013478

36470745 - 36482051

11307